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Kristala L. Jones Prather

Kristala L. Jones Prather

· Arthur Dehon Little Professor; Professor of Chemical Engineering

Massachusetts Institute of Technology · Chemical Engineering

Active 2002–2024

h-index49
Citations9.0k
Papers17935 last 5y
Funding$1.3M
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About

Kristala L. Jones Prather is the Arthur Dehon Little Professor and a Professor of Chemical Engineering at MIT. She is the head of the Department of Chemical Engineering. Her research focuses on chemical engineering, with particular emphasis on biomedical and biotechnology, catalysis and reaction engineering, energy, environment and sustainability, materials, math and computational systems, and transport and thermodynamics. As a faculty member, she contributes to advancing knowledge in these areas and plays a leadership role within the department.

Research topics

  • Computer Science
  • Biotechnology
  • Biology
  • Computational biology
  • Chemistry
  • Engineering
  • Biochemistry
  • Biochemical engineering
  • Cell biology
  • Neuroscience
  • Immunology
  • Bioinformatics
  • Control engineering

Selected publications

  • Dynamic Control of Metabolism

    Annual Review of Chemical and Biomolecular Engineering · 2021 · 68 citations

    Senior authorCorresponding
    • Computer Science
    • Biology
    • Computational biology

    Metabolic engineering reprograms cells to synthesize value-added products. In doing so, endogenous genes are altered and heterologous genes can be introduced to achieve the necessary enzymatic reactions. Dynamic regulation of metabolic flux is a powerful control scheme to alleviate and overcome the competing cellular objectives that arise from the introduction of these production pathways. This review explores dynamic regulation strategies that have demonstrated significant production benefits by targeting the metabolic node corresponding to a specific challenge. We summarize the stimulus-responsive control circuits employed in these strategies that determine the criterion for actuating a dynamic response and then examine the points of control that couple the stimulus-responsive circuit to a shift in metabolic flux.

  • Effective use of biosensors for high-throughput library screening for metabolite production

    Journal of Industrial Microbiology & Biotechnology · 2021 · 64 citations

    Senior authorCorresponding
    • Computer Science
    • Biochemical engineering
    • Computer Science

    The development of fast and affordable microbial production from recombinant pathways is a challenging endeavor, with targeted improvements difficult to predict due to the complex nature of living systems. To address the limitations in biosynthetic pathways, much work has been done to generate large libraries of various genetic parts (promoters, RBSs, enzymes, etc.) to discover library members that bring about significantly improved levels of metabolite production. To evaluate these large libraries, high throughput approaches are necessary, such as those that rely on biosensors. There are various modes of operation to apply biosensors to library screens that are available at different scales of throughput. The effectiveness of each biosensor-based method is dependent on the pathway or strain to which it is applied, and all approaches have strengths and weaknesses to be carefully considered for any high throughput library screen. In this review, we discuss the various approaches used in biosensor screening for improved metabolite production, focusing on transcription factor-based biosensors.

  • The importance and future of biochemical engineering

    Biotechnology and Bioengineering · 2020 · 16 citations

    • Biochemical engineering
    • Chemistry
    • Computational biology

    Today's Biochemical Engineer may contribute to advances in a wide range of technical areas. The recent Biochemical and Molecular Engineering XXI conference focused on "The Next Generation of Biochemical and Molecular Engineering: The role of emerging technologies in tomorrow's products and processes". On the basis of topical discussions at this conference, this perspective synthesizes one vision on where investment in research areas is needed for biotechnology to continue contributing to some of the world's grand challenges.

  • Development of a Quorum-Sensing Based Circuit for Control of Coculture Population Composition in a Naringenin Production System

    ACS Synthetic Biology · 2020 · 96 citations

    Senior authorCorresponding
    • Biology
    • Computational biology
    • Cell biology

    As synthetic biology and metabolic engineering tools improve, it is feasible to construct more complex microbial synthesis systems that may be limited by the machinery and resources available in an individual cell. Coculture fermentation is a promising strategy for overcoming these constraints by distributing objectives between subpopulations, but the primary method for controlling the composition of the coculture of production systems has been limited to control of the inoculum composition. We have developed a quorum sensing (QS)-based growth-regulation circuit that provides an additional parameter for regulating the composition of a coculture over the course of the fermentation. Implementation of this tool in a naringenin-producing coculture resulted in a 60% titer increase over a system that was optimized by varying inoculation ratios only. We additionally demonstrated that the growth control circuit can be implemented in combination with a communication module that couples transcription in one subpopulation to the cell-density of the other population for coordination of behavior, resulting in an additional 60% improvement in naringenin titer.

Recent grants

Frequent coauthors

  • D.M.F. Prazeres

    34 shared
  • L. R. Rodrigues

    Serviço Nacional de Aprendizagem Comercial

    33 shared
  • Gabriel A. Monteiro

    Instituto Superior Técnico

    31 shared
  • Joana L. Rodrigues

    University of Minho

    27 shared
  • Geisa A. L. Gonçalves

    Kyushu University

    21 shared
  • Eric Shiue

    Technische Universität Braunschweig

    18 shared
  • Soyoung Lee

    18 shared
  • Collin H. Martin

    Massachusetts Institute of Technology

    16 shared

Labs

Education

  • Ph.D., Chemical Engineering

    Massachusetts Institute of Technology

    2000
  • M.S., Chemical Engineering

    Massachusetts Institute of Technology

    1996
  • B.S., Chemical Engineering

    University of California, Berkeley

    1994

Awards & honors

  • Elected, Member of the National Academy of Engineering, 2025
  • MIT, Committed to Caring (C2C) Award, 2023-25
  • AIChE's Andreas Acrivos Award for Professional Progress in C…
  • Gordon Y. Billard Award, 2021
  • Fellow of the AAAS, 2018

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