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Dr. Sarah Chen
Stanford · Interpretability · NLP
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Nova · Professor Researcher · re-ranking top 20…
Lindsey Orchard

Lindsey Orchard

· Research TechnologistVerified

Pennsylvania State University · Pathology

Active 2016–2022

h-index13
Citations857
Papers2914 last 5y
Funding
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Research topics

  • Immunology
  • Cell biology
  • Computational biology
  • Biology
  • Genetics

Selected publications

  • Dissecting the role of PfAP2-G in malaria gametocytogenesis

    Nature Communications · 2020 · 208 citations

    • Biology
    • Genetics
    • Cell biology

    In the malaria parasite Plasmodium falciparum, the switch from asexual multiplication to sexual differentiation into gametocytes is essential for transmission to mosquitos. The transcription factor PfAP2-G is a key determinant of sexual commitment that orchestrates this crucial cell fate decision. Here we identify the direct targets of PfAP2-G and demonstrate that it dynamically binds hundreds of sites across the genome. We find that PfAP2-G is a transcriptional activator of early gametocyte genes, and identify differences in PfAP2-G occupancy between gametocytes derived via next-cycle and same-cycle conversion. Our data implicate PfAP2-G not only as a transcriptional activator of gametocyte genes, but also as a potential regulator of genes important for red blood cell invasion. We also find that regulation by PfAP2-G requires interaction with a second transcription factor, PfAP2-I. These results clarify the functional role of PfAP2-G during sexual commitment and early gametocytogenesis.

Frequent coauthors

  • Manuel Llinás

    Pennsylvania State University

    72 shared
  • Philipp Ross

    University of Chicago

    41 shared
  • Thomas D. Otto

    University of Glasgow

    39 shared
  • Julian C. Rayner

    University of Cambridge

    38 shared
  • Timothy J. Russell

    Massachusetts Institute of Technology

    38 shared
  • Lia Chappell

    Wellcome Sanger Institute

    37 shared
  • Matthew Berriman

    University of Glasgow

    37 shared
  • Heather J. Painter

    Center for Biologics Evaluation and Research

    18 shared
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